Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdk9Q99J95 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.36□□□□□ -0.43
Cdk9Q99J95 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.36□□□□□ -0.43
Cdk9Q99J95 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk9Q99J95 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cdk9Q99J95 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.35□□□□□ -0.43
Cdk9Q99J95 Gm14760-201ENSMUST00000121831 999 ntBASIC12.35□□□□□ -0.43
Cdk9Q99J95 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Gm15429-201ENSMUST00000151268 798 ntBASIC12.35□□□□□ -0.43
Cdk9Q99J95 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.35□□□□□ -0.43
Cdk9Q99J95 Gm25927-201ENSMUST00000175058 117 ntBASIC12.35□□□□□ -0.43
Cdk9Q99J95 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Gm28911-201ENSMUST00000188837 117 ntBASIC12.35□□□□□ -0.43
Cdk9Q99J95 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.35□□□□□ -0.43
Cdk9Q99J95 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdk9Q99J95 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.35□□□□□ -0.43
Cdk9Q99J95 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.35□□□□□ -0.43
Cdk9Q99J95 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.35□□□□□ -0.43
Cdk9Q99J95 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.35□□□□□ -0.43
Cdk9Q99J95 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk9Q99J95 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.34□□□□□ -0.43
Cdk9Q99J95 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms