Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Thumpd1Q99J36 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Gm12859-201ENSMUST00000117834 427 ntBASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.91□□□□□ -0.66
Thumpd1Q99J36 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Thumpd1Q99J36 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Thumpd1Q99J36 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.9□□□□□ -0.66
Thumpd1Q99J36 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Gm13369-201ENSMUST00000119442 987 ntBASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Gm9083-201ENSMUST00000120423 819 ntBASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Gm8810-201ENSMUST00000172895 754 ntBASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Gm28911-201ENSMUST00000188837 117 ntBASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Gm44958-201ENSMUST00000203734 736 ntBASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Gm45668-201ENSMUST00000211271 493 ntBASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Gm10146-201ENSMUST00000072739 309 ntBASIC10.9□□□□□ -0.66
Thumpd1Q99J36 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms