Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Gm3332-201ENSMUST00000189337 928 ntBASIC14.45□□□□□ -0.1
Col20a1Q923P0 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Gm4482-201ENSMUST00000200876 742 ntBASIC14.45□□□□□ -0.1
Col20a1Q923P0 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.45□□□□□ -0.1
Col20a1Q923P0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col20a1Q923P0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.45□□□□□ -0.1
Col20a1Q923P0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.44□□□□□ -0.1
Col20a1Q923P0 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Gm5419-201ENSMUST00000119301 527 ntBASIC14.44□□□□□ -0.1
Col20a1Q923P0 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.44□□□□□ -0.1
Col20a1Q923P0 Gm20426-201ENSMUST00000173657 440 ntBASIC14.44□□□□□ -0.1
Col20a1Q923P0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col20a1Q923P0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col20a1Q923P0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Gm11509-201ENSMUST00000117358 325 ntBASIC14.43□□□□□ -0.1
Col20a1Q923P0 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.43□□□□□ -0.1
Col20a1Q923P0 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Gm43947-201ENSMUST00000203019 959 ntBASIC14.43□□□□□ -0.1
Col20a1Q923P0 Gm8959-201ENSMUST00000213150 571 ntBASIC14.43□□□□□ -0.1
Col20a1Q923P0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col20a1Q923P0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.43□□□□□ -0.1
Col20a1Q923P0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col20a1Q923P0 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.42□□□□□ -0.1
Col20a1Q923P0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col20a1Q923P0 Gm23085-201ENSMUST00000157849 293 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms