Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm25043-201ENSMUST00000158604 212 ntBASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Gm10076-201ENSMUST00000073238 384 ntBASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Gm15547-201ENSMUST00000122152 333 ntBASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Gm23119-201ENSMUST00000158610 140 ntBASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Gm7584-201ENSMUST00000175829 940 ntBASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdha3Q91Y16 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdha3Q91Y16 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdha3Q91Y16 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Pcdha3Q91Y16 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdha3Q91Y16 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Gm25214-201ENSMUST00000104573 129 ntBASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Gm25668-201ENSMUST00000157700 129 ntBASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Gm18304-201ENSMUST00000189162 546 ntBASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdha3Q91Y16 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms