Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm19066-201ENSMUST00000193232 1078 ntBASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm8762-201ENSMUST00000193486 339 ntBASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm37042-201ENSMUST00000193816 581 ntBASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm7631-201ENSMUST00000196935 1100 ntBASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 AC140409.4-201ENSMUST00000215757 538 ntBASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 AC166902.3-201ENSMUST00000216696 991 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Olfr52-202ENSMUST00000215138 2751 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Gm23931-201ENSMUST00000103842 109 ntBASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Gm16363-201ENSMUST00000132460 877 ntBASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 1700019E08Rik-201ENSMUST00000134308 424 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Milr1-203ENSMUST00000147326 1234 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Gm37054-201ENSMUST00000193481 543 ntBASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Gm37008-201ENSMUST00000195712 319 ntBASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Gm19184-201ENSMUST00000196798 928 ntBASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Gm5087-204ENSMUST00000225820 645 ntBASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pcdhb20Q91XZ9 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Gm31463-201ENSMUST00000208799 1479 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms