Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Gm27514-201ENSMUST00000183692 110 ntBASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhga11Q91XY8 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Gm8018-201ENSMUST00000173536 789 ntBASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Gm45331-201ENSMUST00000209868 554 ntBASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.9□□□□□ -0.5
Pcdhga11Q91XY8 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhga11Q91XY8 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhga11Q91XY8 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.89□□□□□ -0.51
Pcdhga11Q91XY8 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms