Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga3Q91XY5 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Gm14760-201ENSMUST00000121831 999 ntBASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Gm7809-201ENSMUST00000153199 742 ntBASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Gm6222-202ENSMUST00000182143 629 ntBASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Gm27514-201ENSMUST00000183692 110 ntBASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Gm25857-201ENSMUST00000082788 129 ntBASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Pcdhga3Q91XY5 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Pcdhga3Q91XY5 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdhga3Q91XY5 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Pcdhga3Q91XY5 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdhga3Q91XY5 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdhga3Q91XY5 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.96□□□□□ -0.66
Pcdhga3Q91XY5 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.96□□□□□ -0.66
Pcdhga3Q91XY5 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdhga3Q91XY5 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdhga3Q91XY5 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdhga3Q91XY5 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdhga3Q91XY5 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdhga3Q91XY5 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Pcdhga3Q91XY5 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms