Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usb1Q91W78 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Usb1Q91W78 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usb1Q91W78 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Usb1Q91W78 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.17□□□□□ -0.46
Usb1Q91W78 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.17□□□□□ -0.46
Usb1Q91W78 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.17□□□□□ -0.46
Usb1Q91W78 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Usb1Q91W78 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Usb1Q91W78 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.17□□□□□ -0.46
Usb1Q91W78 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.17□□□□□ -0.46
Usb1Q91W78 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Gm24255-201ENSMUST00000104481 128 ntBASIC12.17□□□□□ -0.46
Usb1Q91W78 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Usb1Q91W78 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.17□□□□□ -0.46
Usb1Q91W78 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Usb1Q91W78 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.17□□□□□ -0.46
Usb1Q91W78 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.17□□□□□ -0.46
Usb1Q91W78 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.17□□□□□ -0.46
Usb1Q91W78 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Usb1Q91W78 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.17□□□□□ -0.46
Usb1Q91W78 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.17□□□□□ -0.46
Usb1Q91W78 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Usb1Q91W78 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.17□□□□□ -0.46
Usb1Q91W78 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Usb1Q91W78 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Usb1Q91W78 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Usb1Q91W78 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usb1Q91W78 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Usb1Q91W78 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.16□□□□□ -0.46
Usb1Q91W78 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.16□□□□□ -0.46
Usb1Q91W78 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Usb1Q91W78 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Usb1Q91W78 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Gm11597-201ENSMUST00000121423 964 ntBASIC12.16□□□□□ -0.46
Usb1Q91W78 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.16□□□□□ -0.46
Usb1Q91W78 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usb1Q91W78 Gm20482-202ENSMUST00000174729 825 ntBASIC12.16□□□□□ -0.46
Usb1Q91W78 Gm26956-201ENSMUST00000182176 986 ntBASIC12.16□□□□□ -0.46
Usb1Q91W78 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.16□□□□□ -0.46
Usb1Q91W78 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.16□□□□□ -0.46
Usb1Q91W78 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.16□□□□□ -0.46
Usb1Q91W78 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.16□□□□□ -0.46
Usb1Q91W78 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usb1Q91W78 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.16□□□□□ -0.46
Usb1Q91W78 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.16□□□□□ -0.46
Usb1Q91W78 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usb1Q91W78 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 148.1 ms