Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Gm5866-201ENSMUST00000177881 973 ntBASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Gm18307-201ENSMUST00000206864 949 ntBASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Gm19220-201ENSMUST00000222682 803 ntBASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Gm24231-201ENSMUST00000104315 133 ntBASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Gm7488-201ENSMUST00000117148 684 ntBASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Gm6152-201ENSMUST00000151704 340 ntBASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Gm23363-201ENSMUST00000175024 79 ntBASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Gm6218-201ENSMUST00000219812 628 ntBASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.4□□□□□ -0.42
Rpa1Q8VEE4 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Rpa1Q8VEE4 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rpa1Q8VEE4 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rpa1Q8VEE4 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rpa1Q8VEE4 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rpa1Q8VEE4 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Gm9519-201ENSMUST00000206108 1337 ntBASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Gm12341-201ENSMUST00000119724 503 ntBASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Gm9723-201ENSMUST00000192100 457 ntBASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms