Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Gm19184-201ENSMUST00000196798 928 ntBASIC11.87□□□□□ -0.51
Rnf8Q8VC56 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Mir1938-201ENSMUST00000158746 100 ntBASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf8Q8VC56 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.85□□□□□ -0.51
Rnf8Q8VC56 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Gm26035-201ENSMUST00000083065 308 ntBASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Mir339-201ENSMUST00000083659 96 ntBASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Gm10478-201ENSMUST00000084451 396 ntBASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms