Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Gm19327-201ENSMUST00000220651 3271 ntBASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Gm12428-201ENSMUST00000119844 727 ntBASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Gm13616-201ENSMUST00000120600 222 ntBASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc9Q8VC31 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 CT868720.1-201ENSMUST00000223069 2544 ntBASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Gm43692-201ENSMUST00000198236 1062 ntBASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc9Q8VC31 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms