Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nudcd3Q8R1N4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Gm8810-201ENSMUST00000172895 754 ntBASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Gm27701-201ENSMUST00000184498 110 ntBASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Gm4034-201ENSMUST00000187674 480 ntBASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Gm38092-201ENSMUST00000195600 653 ntBASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Gm7287-201ENSMUST00000205267 602 ntBASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Gm4768-201ENSMUST00000206199 686 ntBASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Gm45668-201ENSMUST00000211271 493 ntBASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nudcd3Q8R1N4 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Gm27243-201ENSMUST00000183964 521 ntBASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Gm28911-201ENSMUST00000188837 117 ntBASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Gm19163-201ENSMUST00000223313 780 ntBASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Gm10146-201ENSMUST00000072739 309 ntBASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd3Q8R1N4 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd3Q8R1N4 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd3Q8R1N4 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Nudcd3Q8R1N4 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nudcd3Q8R1N4 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd3Q8R1N4 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.22□□□□□ -0.45
Nudcd3Q8R1N4 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.22□□□□□ -0.45
Nudcd3Q8R1N4 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.22□□□□□ -0.45
Nudcd3Q8R1N4 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms