Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.57□□□□□ -0.56
Clrn1Q8K445 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn1Q8K445 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.56□□□□□ -0.56
Clrn1Q8K445 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Mir1938-201ENSMUST00000158746 100 ntBASIC11.56□□□□□ -0.56
Clrn1Q8K445 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Gm6621-201ENSMUST00000193251 772 ntBASIC11.56□□□□□ -0.56
Clrn1Q8K445 Gm38266-201ENSMUST00000194931 421 ntBASIC11.56□□□□□ -0.56
Clrn1Q8K445 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.56□□□□□ -0.56
Clrn1Q8K445 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.56□□□□□ -0.56
Clrn1Q8K445 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.56□□□□□ -0.56
Clrn1Q8K445 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.56□□□□□ -0.56
Clrn1Q8K445 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Matn2-203ENSMUST00000226766 3252 ntBASIC11.56□□□□□ -0.56
Clrn1Q8K445 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.56□□□□□ -0.56
Clrn1Q8K445 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Clrn1Q8K445 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Gm24934-201ENSMUST00000103764 111 ntBASIC11.55□□□□□ -0.56
Clrn1Q8K445 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Gm11434-201ENSMUST00000122379 629 ntBASIC11.55□□□□□ -0.56
Clrn1Q8K445 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.55□□□□□ -0.56
Clrn1Q8K445 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.55□□□□□ -0.56
Clrn1Q8K445 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn1Q8K445 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Clrn1Q8K445 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms