Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13□□□□□ -0.33
Rftn2Q8CHX7 Gm5419-201ENSMUST00000119301 527 ntBASIC13□□□□□ -0.33
Rftn2Q8CHX7 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13□□□□□ -0.33
Rftn2Q8CHX7 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Gm7848-201ENSMUST00000210739 718 ntBASIC13□□□□□ -0.33
Rftn2Q8CHX7 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Gm21811-201ENSMUST00000096485 930 ntBASIC13□□□□□ -0.33
Rftn2Q8CHX7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Gm43364-201ENSMUST00000196046 3274 ntBASIC13□□□□□ -0.33
Rftn2Q8CHX7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Gm37513-201ENSMUST00000194830 2268 ntBASIC13□□□□□ -0.33
Rftn2Q8CHX7 Gm38378-201ENSMUST00000195153 2268 ntBASIC13□□□□□ -0.33
Rftn2Q8CHX7 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rftn2Q8CHX7 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Gm12196-201ENSMUST00000120954 262 ntBASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Gm11450-201ENSMUST00000121144 333 ntBASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Mir6979-201ENSMUST00000183927 56 ntBASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rftn2Q8CHX7 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Gm12501-201ENSMUST00000119163 529 ntBASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Gm15610-201ENSMUST00000120584 195 ntBASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 B9d1os-201ENSMUST00000137010 674 ntBASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Gm807-202ENSMUST00000224929 408 ntBASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rftn2Q8CHX7 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rftn2Q8CHX7 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms