Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Gm11578-201ENSMUST00000118530 459 ntBASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Gm12712-201ENSMUST00000120676 801 ntBASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Gm42511-201ENSMUST00000196160 234 ntBASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Gm45135-201ENSMUST00000206787 1184 ntBASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 CT030135.2-201ENSMUST00000225255 893 ntBASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Arhgef33-210ENSMUST00000225548 456 ntBASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zc3h3Q8CHP0 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Gm22846-201ENSMUST00000157706 270 ntBASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Gm7719-201ENSMUST00000182374 975 ntBASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Gm18711-201ENSMUST00000199341 750 ntBASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Zc3h3Q8CHP0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms