Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox30Q8CGW4 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox30Q8CGW4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox30Q8CGW4 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox30Q8CGW4 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox30Q8CGW4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox30Q8CGW4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sox30Q8CGW4 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox30Q8CGW4 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox30Q8CGW4 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox30Q8CGW4 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox30Q8CGW4 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sox30Q8CGW4 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.36□□□□□ -0.27
Sox30Q8CGW4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox30Q8CGW4 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox30Q8CGW4 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox30Q8CGW4 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox30Q8CGW4 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.36□□□□□ -0.27
Sox30Q8CGW4 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox30Q8CGW4 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox30Q8CGW4 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.36□□□□□ -0.27
Sox30Q8CGW4 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Gm43818-201ENSMUST00000200605 466 ntBASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Gm17931-201ENSMUST00000208132 634 ntBASIC13.35□□□□□ -0.27
Sox30Q8CGW4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox30Q8CGW4 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Gm14441-201ENSMUST00000121960 540 ntBASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Gm27023-201ENSMUST00000182372 285 ntBASIC13.34□□□□□ -0.27
Sox30Q8CGW4 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Gm19994-201ENSMUST00000217086 586 ntBASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox30Q8CGW4 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sox30Q8CGW4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sox30Q8CGW4 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Sox30Q8CGW4 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.33□□□□□ -0.27
Sox30Q8CGW4 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Sox30Q8CGW4 Gm36987-201ENSMUST00000194704 2979 ntBASIC13.33□□□□□ -0.28
Sox30Q8CGW4 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sox30Q8CGW4 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox30Q8CGW4 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms