Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Gm12036-201ENSMUST00000120008 530 ntBASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Gm25668-201ENSMUST00000157700 129 ntBASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Gm25700-201ENSMUST00000177693 110 ntBASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Gm6082-201ENSMUST00000215204 454 ntBASIC14.31□□□□□ -0.12
Usp44Q8C2S0 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp44Q8C2S0 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp44Q8C2S0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Mir6420-201ENSMUST00000185032 102 ntBASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Gm9136-201ENSMUST00000193368 454 ntBASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Gm4607-201ENSMUST00000206649 577 ntBASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Gm5455-201ENSMUST00000058710 715 ntBASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp44Q8C2S0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms