Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
SprnQ8BWU1 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Gm13392-201ENSMUST00000117708 150 ntBASIC10.81□□□□□ -0.68
SprnQ8BWU1 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Gm11597-201ENSMUST00000121423 964 ntBASIC10.81□□□□□ -0.68
SprnQ8BWU1 Gm22331-201ENSMUST00000158066 136 ntBASIC10.81□□□□□ -0.68
SprnQ8BWU1 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Gm24196-201ENSMUST00000179161 110 ntBASIC10.81□□□□□ -0.68
SprnQ8BWU1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Gm9136-201ENSMUST00000193368 454 ntBASIC10.81□□□□□ -0.68
SprnQ8BWU1 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.81□□□□□ -0.68
SprnQ8BWU1 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Gm24526-201ENSMUST00000082921 158 ntBASIC10.81□□□□□ -0.68
SprnQ8BWU1 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.81□□□□□ -0.68
SprnQ8BWU1 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SprnQ8BWU1 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SprnQ8BWU1 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.8□□□□□ -0.68
SprnQ8BWU1 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SprnQ8BWU1 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.8□□□□□ -0.68
SprnQ8BWU1 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.8□□□□□ -0.68
SprnQ8BWU1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
SprnQ8BWU1 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Gm8810-201ENSMUST00000172895 754 ntBASIC10.8□□□□□ -0.68
SprnQ8BWU1 Proscos-202ENSMUST00000178990 666 ntBASIC10.8□□□□□ -0.68
SprnQ8BWU1 Gm37424-201ENSMUST00000191727 561 ntBASIC10.8□□□□□ -0.68
SprnQ8BWU1 Gm40466-201ENSMUST00000212174 422 ntBASIC10.8□□□□□ -0.68
SprnQ8BWU1 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
SprnQ8BWU1 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Gm8420-201ENSMUST00000097103 598 ntBASIC10.8□□□□□ -0.68
SprnQ8BWU1 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.8□□□□□ -0.68
SprnQ8BWU1 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.8□□□□□ -0.68
SprnQ8BWU1 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.8□□□□□ -0.68
SprnQ8BWU1 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
SprnQ8BWU1 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SprnQ8BWU1 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.8□□□□□ -0.68
SprnQ8BWU1 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SprnQ8BWU1 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.79□□□□□ -0.68
SprnQ8BWU1 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.79□□□□□ -0.68
SprnQ8BWU1 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms