Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Gm14247-201ENSMUST00000120950 237 ntBASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Gm2383-201ENSMUST00000181461 807 ntBASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.54□□□□□ -0.4
Nup54Q8BTS4 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Nup54Q8BTS4 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Gm7722-201ENSMUST00000120646 741 ntBASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Gm14017-201ENSMUST00000121934 386 ntBASIC12.53□□□□□ -0.4
Nup54Q8BTS4 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup54Q8BTS4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup54Q8BTS4 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup54Q8BTS4 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup54Q8BTS4 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup54Q8BTS4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Nup54Q8BTS4 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup54Q8BTS4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.52□□□□□ -0.4
Nup54Q8BTS4 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Nup54Q8BTS4 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup54Q8BTS4 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup54Q8BTS4 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nup54Q8BTS4 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup54Q8BTS4 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms