Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13□□□□□ -0.33
Rd3Q8BRE0 Gm18556-201ENSMUST00000219748 1031 ntBASIC13□□□□□ -0.33
Rd3Q8BRE0 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rd3Q8BRE0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13□□□□□ -0.33
Rd3Q8BRE0 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13□□□□□ -0.33
Rd3Q8BRE0 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13□□□□□ -0.33
Rd3Q8BRE0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Gm23596-201ENSMUST00000104304 132 ntBASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Gm15131-201ENSMUST00000119124 595 ntBASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Gm7722-201ENSMUST00000120646 741 ntBASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Gm270-201ENSMUST00000223010 976 ntBASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Gm807-202ENSMUST00000224929 408 ntBASIC12.99□□□□□ -0.33
Rd3Q8BRE0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rd3Q8BRE0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.98□□□□□ -0.33
Rd3Q8BRE0 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Gm12196-201ENSMUST00000120954 262 ntBASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Gm44126-201ENSMUST00000204831 514 ntBASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Gm26448-201ENSMUST00000082446 203 ntBASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rd3Q8BRE0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms