Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Gm13689-201ENSMUST00000119360 685 ntBASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Gm27702-201ENSMUST00000184512 56 ntBASIC10.09□□□□□ -0.79
Smco3Q8BQM7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Gm44069-201ENSMUST00000204898 506 ntBASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Itm2b-204ENSMUST00000228637 783 ntBASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco3Q8BQM7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Gm12291-201ENSMUST00000121627 311 ntBASIC10.08□□□□□ -0.8
Smco3Q8BQM7 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.08□□□□□ -0.8
Smco3Q8BQM7 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco3Q8BQM7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms