Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Gm24548-201ENSMUST00000158650 108 ntBASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Gm27390-201ENSMUST00000184516 176 ntBASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Gm43179-201ENSMUST00000198797 275 ntBASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Gm32025-201ENSMUST00000217960 307 ntBASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh20Q8BIZ0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Gm38266-201ENSMUST00000194931 421 ntBASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh20Q8BIZ0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh20Q8BIZ0 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh20Q8BIZ0 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms