Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Gm12384-201ENSMUST00000119228 919 ntBASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Gm11803-201ENSMUST00000119966 444 ntBASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.03□□□□□ -0.32
Trim6Q8BGE7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Gm32390-201ENSMUST00000212713 1172 ntBASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.03□□□□□ -0.32
Trim6Q8BGE7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim6Q8BGE7 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.02□□□□□ -0.32
Trim6Q8BGE7 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim6Q8BGE7 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim6Q8BGE7 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim6Q8BGE7 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim6Q8BGE7 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.02□□□□□ -0.32
Trim6Q8BGE7 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim6Q8BGE7 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim6Q8BGE7 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Gm24231-201ENSMUST00000104315 133 ntBASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Snord83b-201ENSMUST00000104546 94 ntBASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Gm12203-201ENSMUST00000118235 598 ntBASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Gm12209-201ENSMUST00000120089 596 ntBASIC13.02□□□□□ -0.33
Trim6Q8BGE7 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Gm20614-201ENSMUST00000177106 632 ntBASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim6Q8BGE7 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms