Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.33□□□□□ -0.44
Usp8Q80U87 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.33□□□□□ -0.44
Usp8Q80U87 Gm19184-201ENSMUST00000196798 928 ntBASIC12.33□□□□□ -0.44
Usp8Q80U87 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Usp8Q80U87 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.33□□□□□ -0.44
Usp8Q80U87 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.33□□□□□ -0.44
Usp8Q80U87 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.33□□□□□ -0.44
Usp8Q80U87 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp8Q80U87 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Usp8Q80U87 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.32□□□□□ -0.44
Usp8Q80U87 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.32□□□□□ -0.44
Usp8Q80U87 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Usp8Q80U87 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.32□□□□□ -0.44
Usp8Q80U87 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.32□□□□□ -0.44
Usp8Q80U87 Gm43818-201ENSMUST00000200605 466 ntBASIC12.32□□□□□ -0.44
Usp8Q80U87 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.32□□□□□ -0.44
Usp8Q80U87 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.32□□□□□ -0.44
Usp8Q80U87 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.32□□□□□ -0.44
Usp8Q80U87 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Usp8Q80U87 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp8Q80U87 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.31□□□□□ -0.44
Usp8Q80U87 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.31□□□□□ -0.44
Usp8Q80U87 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.31□□□□□ -0.44
Usp8Q80U87 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Usp8Q80U87 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Usp8Q80U87 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Usp8Q80U87 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 Gm1335-201ENSMUST00000121653 386 ntBASIC12.31□□□□□ -0.44
Usp8Q80U87 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.31□□□□□ -0.44
Usp8Q80U87 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Usp8Q80U87 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.31□□□□□ -0.44
Usp8Q80U87 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.31□□□□□ -0.44
Usp8Q80U87 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Usp8Q80U87 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Usp8Q80U87 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.31□□□□□ -0.44
Usp8Q80U87 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.31□□□□□ -0.44
Usp8Q80U87 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp8Q80U87 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms