Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssx9Q6XAS3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssx9Q6XAS3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ssx9Q6XAS3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssx9Q6XAS3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Gm6023-201ENSMUST00000118217 606 ntBASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Gm13829-201ENSMUST00000119600 138 ntBASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Gm11425-201ENSMUST00000119608 498 ntBASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Gm13875-201ENSMUST00000120162 282 ntBASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Gm13570-201ENSMUST00000140763 309 ntBASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Gm27514-201ENSMUST00000183692 110 ntBASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Gm42937-201ENSMUST00000197360 752 ntBASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Gm9396-201ENSMUST00000076703 567 ntBASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.19□□□□□ -0.46
Ssx9Q6XAS3 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Gm22018-201ENSMUST00000104357 131 ntBASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Mir1247-201ENSMUST00000116706 82 ntBASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Gm5745-201ENSMUST00000183748 313 ntBASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Gm5370-201ENSMUST00000187187 574 ntBASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssx9Q6XAS3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms