Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Gm15744-201ENSMUST00000161734 213 ntBASIC14.21□□□□□ -0.13
Nup98Q6PFD9 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Gm37981-201ENSMUST00000194280 535 ntBASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Gm5982-201ENSMUST00000196234 512 ntBASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup98Q6PFD9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Nup98Q6PFD9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup98Q6PFD9 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup98Q6PFD9 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nup98Q6PFD9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nup98Q6PFD9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup98Q6PFD9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Nup98Q6PFD9 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Nup98Q6PFD9 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Gm11451-201ENSMUST00000118946 630 ntBASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Gm11960-201ENSMUST00000122068 925 ntBASIC14.2□□□□□ -0.14
Nup98Q6PFD9 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Gm6108-201ENSMUST00000208365 367 ntBASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Gm9132-201ENSMUST00000210182 832 ntBASIC14.2□□□□□ -0.14
Nup98Q6PFD9 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Gm5879-201ENSMUST00000089501 1209 ntBASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Gm17213-201ENSMUST00000165161 1360 ntBASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Gm20495-201ENSMUST00000173902 235 ntBASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Gm44421-201ENSMUST00000205064 1221 ntBASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 AC124433.1-201ENSMUST00000224483 1063 ntBASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Gm6430-201ENSMUST00000054664 1248 ntBASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.2□□□□□ -0.14
Nup98Q6PFD9 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Gm11244-201ENSMUST00000121243 237 ntBASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms