Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Gm25214-201ENSMUST00000104573 129 ntBASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Gm4034-201ENSMUST00000187674 480 ntBASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Gm35960-201ENSMUST00000202712 767 ntBASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Gm9257-201ENSMUST00000221254 232 ntBASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Map1b-203ENSMUST00000223725 2669 ntBASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc2Q6PDG5 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Gm22323-201ENSMUST00000103832 109 ntBASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Gm14999-201ENSMUST00000121039 624 ntBASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Gm25043-201ENSMUST00000158604 212 ntBASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc2Q6PDG5 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Gm13570-201ENSMUST00000140763 309 ntBASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Gm26083-201ENSMUST00000157904 193 ntBASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.29□□□□□ -0.12
Smarcc2Q6PDG5 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms