Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm45085-201ENSMUST00000209100 441 ntBASIC14.5□□□□□ -0.09
Col11a2Q64739 AC153152.3-201ENSMUST00000222188 1135 ntBASIC14.5□□□□□ -0.09
Col11a2Q64739 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a2Q64739 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Col11a2Q64739 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
Col11a2Q64739 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a2Q64739 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Col11a2Q64739 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a2Q64739 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a2Q64739 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Col11a2Q64739 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a2Q64739 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.5□□□□□ -0.09
Col11a2Q64739 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a2Q64739 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a2Q64739 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a2Q64739 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Col11a2Q64739 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a2Q64739 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a2Q64739 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a2Q64739 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a2Q64739 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col11a2Q64739 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC14.49□□□□□ -0.09
Col11a2Q64739 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC14.49□□□□□ -0.09
Col11a2Q64739 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC14.49□□□□□ -0.09
Col11a2Q64739 Gm25492-201ENSMUST00000157383 129 ntBASIC14.49□□□□□ -0.09
Col11a2Q64739 Gm26368-201ENSMUST00000157826 118 ntBASIC14.49□□□□□ -0.09
Col11a2Q64739 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC14.49□□□□□ -0.09
Col11a2Q64739 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC14.49□□□□□ -0.09
Col11a2Q64739 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col11a2Q64739 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC14.49□□□□□ -0.09
Col11a2Q64739 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Col11a2Q64739 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Grk6-205ENSMUST00000224653 2976 ntBASIC14.49□□□□□ -0.09
Col11a2Q64739 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Col11a2Q64739 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Col11a2Q64739 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC14.49□□□□□ -0.09
Col11a2Q64739 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC14.49□□□□□ -0.09
Col11a2Q64739 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Olfr692-202ENSMUST00000217827 1126 ntBASIC14.49□□□□□ -0.09
Col11a2Q64739 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Col11a2Q64739 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.49□□□□□ -0.09
Col11a2Q64739 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col11a2Q64739 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col11a2Q64739 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a2Q64739 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a2Q64739 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a2Q64739 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a2Q64739 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Col11a2Q64739 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a2Q64739 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col11a2Q64739 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a2Q64739 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a2Q64739 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC14.48□□□□□ -0.09
Col11a2Q64739 Gng5-ps-201ENSMUST00000120931 205 ntBASIC14.48□□□□□ -0.09
Col11a2Q64739 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC14.48□□□□□ -0.09
Col11a2Q64739 Gm25554-201ENSMUST00000158075 113 ntBASIC14.48□□□□□ -0.09
Col11a2Q64739 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC14.48□□□□□ -0.09
Col11a2Q64739 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a2Q64739 Gm5982-201ENSMUST00000196234 512 ntBASIC14.48□□□□□ -0.09
Col11a2Q64739 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC14.48□□□□□ -0.09
Col11a2Q64739 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC14.48□□□□□ -0.09
Col11a2Q64739 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC14.48□□□□□ -0.09
Col11a2Q64739 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC14.48□□□□□ -0.09
Col11a2Q64739 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a2Q64739 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.48□□□□□ -0.09
Col11a2Q64739 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a2Q64739 Smok4a-201ENSMUST00000074512 1455 ntBASIC14.48□□□□□ -0.09
Col11a2Q64739 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a2Q64739 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a2Q64739 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col11a2Q64739 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.48□□□□□ -0.09
Col11a2Q64739 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms