Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxn1Q61575 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.98□□□□□ -0.17
Foxn1Q61575 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Foxn1Q61575 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.98□□□□□ -0.17
Foxn1Q61575 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxn1Q61575 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Foxn1Q61575 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxn1Q61575 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Foxn1Q61575 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.98□□□□□ -0.17
Foxn1Q61575 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.98□□□□□ -0.17
Foxn1Q61575 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Foxn1Q61575 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxn1Q61575 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Foxn1Q61575 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.97□□□□□ -0.17
Foxn1Q61575 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Foxn1Q61575 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Foxn1Q61575 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.97□□□□□ -0.17
Foxn1Q61575 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Foxn1Q61575 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Foxn1Q61575 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Foxn1Q61575 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Foxn1Q61575 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Foxn1Q61575 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC13.97□□□□□ -0.17
Foxn1Q61575 Gm12579-201ENSMUST00000118040 783 ntBASIC13.97□□□□□ -0.17
Foxn1Q61575 Gm7722-201ENSMUST00000120646 741 ntBASIC13.97□□□□□ -0.17
Foxn1Q61575 Gm12030-201ENSMUST00000121917 223 ntBASIC13.97□□□□□ -0.17
Foxn1Q61575 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC13.97□□□□□ -0.17
Foxn1Q61575 Gm9022-201ENSMUST00000182482 992 ntBASIC13.97□□□□□ -0.17
Foxn1Q61575 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.97□□□□□ -0.17
Foxn1Q61575 Trav11n-201ENSMUST00000200113 343 ntBASIC13.97□□□□□ -0.17
Foxn1Q61575 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Foxn1Q61575 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxn1Q61575 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.96□□□□□ -0.17
Foxn1Q61575 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxn1Q61575 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Foxn1Q61575 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxn1Q61575 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxn1Q61575 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxn1Q61575 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxn1Q61575 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxn1Q61575 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Foxn1Q61575 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxn1Q61575 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.96□□□□□ -0.17
Foxn1Q61575 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.96□□□□□ -0.17
Foxn1Q61575 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Foxn1Q61575 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxn1Q61575 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.96□□□□□ -0.17
Foxn1Q61575 Gm45527-201ENSMUST00000211052 774 ntBASIC13.96□□□□□ -0.17
Foxn1Q61575 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Foxn1Q61575 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
Foxn1Q61575 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.96□□□□□ -0.17
Foxn1Q61575 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxn1Q61575 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxn1Q61575 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Foxn1Q61575 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Foxn1Q61575 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxn1Q61575 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.96□□□□□ -0.17
Foxn1Q61575 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxn1Q61575 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Foxn1Q61575 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxn1Q61575 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.96□□□□□ -0.18
Foxn1Q61575 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxn1Q61575 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Foxn1Q61575 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxn1Q61575 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Foxn1Q61575 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Foxn1Q61575 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxn1Q61575 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Foxn1Q61575 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxn1Q61575 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxn1Q61575 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.95□□□□□ -0.18
Foxn1Q61575 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Foxn1Q61575 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxn1Q61575 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxn1Q61575 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms