Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Sox17Q61473 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.47□□□□□ -0.57
Sox17Q61473 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.47□□□□□ -0.57
Sox17Q61473 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Sox17Q61473 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Sox17Q61473 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox17Q61473 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox17Q61473 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox17Q61473 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.46□□□□□ -0.57
Sox17Q61473 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox17Q61473 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox17Q61473 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.46□□□□□ -0.57
Sox17Q61473 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox17Q61473 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sox17Q61473 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox17Q61473 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Sox17Q61473 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox17Q61473 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox17Q61473 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox17Q61473 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox17Q61473 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox17Q61473 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox17Q61473 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox17Q61473 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.46□□□□□ -0.57
Sox17Q61473 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.46□□□□□ -0.57
Sox17Q61473 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox17Q61473 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox17Q61473 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.46□□□□□ -0.57
Sox17Q61473 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.46□□□□□ -0.57
Sox17Q61473 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.46□□□□□ -0.57
Sox17Q61473 Gm4034-201ENSMUST00000187674 480 ntBASIC11.46□□□□□ -0.57
Sox17Q61473 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox17Q61473 Gm37922-201ENSMUST00000195596 455 ntBASIC11.46□□□□□ -0.57
Sox17Q61473 Gm38092-201ENSMUST00000195600 653 ntBASIC11.46□□□□□ -0.57
Sox17Q61473 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.46□□□□□ -0.57
Sox17Q61473 Gm38671-201ENSMUST00000200573 130 ntBASIC11.46□□□□□ -0.57
Sox17Q61473 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.46□□□□□ -0.57
Sox17Q61473 Gm8463-201ENSMUST00000208573 613 ntBASIC11.46□□□□□ -0.57
Sox17Q61473 Gm24136-201ENSMUST00000083374 165 ntBASIC11.46□□□□□ -0.57
Sox17Q61473 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox17Q61473 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox17Q61473 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox17Q61473 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox17Q61473 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sox17Q61473 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.46□□□□□ -0.58
Sox17Q61473 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox17Q61473 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox17Q61473 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.58
Sox17Q61473 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox17Q61473 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.45□□□□□ -0.58
Sox17Q61473 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.45□□□□□ -0.58
Sox17Q61473 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.45□□□□□ -0.58
Sox17Q61473 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sox17Q61473 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sox17Q61473 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.45□□□□□ -0.58
Sox17Q61473 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Sox17Q61473 Gm27243-201ENSMUST00000183964 521 ntBASIC11.45□□□□□ -0.58
Sox17Q61473 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.45□□□□□ -0.58
Sox17Q61473 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Sox17Q61473 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.45□□□□□ -0.58
Sox17Q61473 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sox17Q61473 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sox17Q61473 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sox17Q61473 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Sox17Q61473 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sox17Q61473 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.45□□□□□ -0.58
Sox17Q61473 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox17Q61473 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.45□□□□□ -0.58
Sox17Q61473 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sox17Q61473 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms