Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.97□□□□□ -0.49
Vsx2Q61412 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
Vsx2Q61412 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vsx2Q61412 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
Vsx2Q61412 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vsx2Q61412 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.97□□□□□ -0.49
Vsx2Q61412 Gm13875-201ENSMUST00000120162 282 ntBASIC11.97□□□□□ -0.49
Vsx2Q61412 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.97□□□□□ -0.49
Vsx2Q61412 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Vsx2Q61412 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.97□□□□□ -0.49
Vsx2Q61412 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vsx2Q61412 Gm43758-201ENSMUST00000199500 367 ntBASIC11.97□□□□□ -0.49
Vsx2Q61412 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.97□□□□□ -0.49
Vsx2Q61412 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.97□□□□□ -0.49
Vsx2Q61412 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Vsx2Q61412 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Vsx2Q61412 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.97□□□□□ -0.49
Vsx2Q61412 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx2Q61412 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx2Q61412 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Vsx2Q61412 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Vsx2Q61412 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Vsx2Q61412 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx2Q61412 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx2Q61412 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.96□□□□□ -0.49
Vsx2Q61412 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Vsx2Q61412 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx2Q61412 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx2Q61412 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx2Q61412 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx2Q61412 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.96□□□□□ -0.49
Vsx2Q61412 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx2Q61412 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.96□□□□□ -0.49
Vsx2Q61412 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx2Q61412 Gm11964-201ENSMUST00000120982 444 ntBASIC11.96□□□□□ -0.49
Vsx2Q61412 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx2Q61412 Gm8018-201ENSMUST00000173536 789 ntBASIC11.96□□□□□ -0.49
Vsx2Q61412 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.96□□□□□ -0.49
Vsx2Q61412 Gm7783-201ENSMUST00000204795 781 ntBASIC11.96□□□□□ -0.49
Vsx2Q61412 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.96□□□□□ -0.49
Vsx2Q61412 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.96□□□□□ -0.49
Vsx2Q61412 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx2Q61412 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx2Q61412 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx2Q61412 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.96□□□□□ -0.5
Vsx2Q61412 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vsx2Q61412 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vsx2Q61412 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vsx2Q61412 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Vsx2Q61412 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.96□□□□□ -0.5
Vsx2Q61412 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.96□□□□□ -0.5
Vsx2Q61412 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vsx2Q61412 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Vsx2Q61412 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vsx2Q61412 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.95□□□□□ -0.5
Vsx2Q61412 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
Vsx2Q61412 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Vsx2Q61412 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.95□□□□□ -0.5
Vsx2Q61412 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Vsx2Q61412 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Vsx2Q61412 Gm13736-201ENSMUST00000119272 253 ntBASIC11.95□□□□□ -0.5
Vsx2Q61412 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.95□□□□□ -0.5
Vsx2Q61412 Gm13350-201ENSMUST00000120519 479 ntBASIC11.95□□□□□ -0.5
Vsx2Q61412 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms