Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ripk1Q60855 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ripk1Q60855 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ripk1Q60855 Gm10076-201ENSMUST00000073238 384 ntBASIC11.58□□□□□ -0.56
Ripk1Q60855 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ripk1Q60855 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ripk1Q60855 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ripk1Q60855 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ripk1Q60855 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ripk1Q60855 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ripk1Q60855 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ripk1Q60855 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ripk1Q60855 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ripk1Q60855 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ripk1Q60855 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ripk1Q60855 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ripk1Q60855 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.58□□□□□ -0.56
Ripk1Q60855 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Ripk1Q60855 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ripk1Q60855 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Ripk1Q60855 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.57□□□□□ -0.56
Ripk1Q60855 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.57□□□□□ -0.56
Ripk1Q60855 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ripk1Q60855 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.57□□□□□ -0.56
Ripk1Q60855 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ripk1Q60855 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Gm10434-201ENSMUST00000101158 471 ntBASIC11.57□□□□□ -0.56
Ripk1Q60855 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.57□□□□□ -0.56
Ripk1Q60855 Gm38002-201ENSMUST00000193255 180 ntBASIC11.57□□□□□ -0.56
Ripk1Q60855 AY702102-202ENSMUST00000194651 1173 ntBASIC11.57□□□□□ -0.56
Ripk1Q60855 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.57□□□□□ -0.56
Ripk1Q60855 Gm39404-201ENSMUST00000216350 313 ntBASIC11.57□□□□□ -0.56
Ripk1Q60855 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.57□□□□□ -0.56
Ripk1Q60855 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ripk1Q60855 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ripk1Q60855 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.57□□□□□ -0.56
Ripk1Q60855 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.57□□□□□ -0.56
Ripk1Q60855 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ripk1Q60855 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ripk1Q60855 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ripk1Q60855 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ripk1Q60855 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ripk1Q60855 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ripk1Q60855 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.56□□□□□ -0.56
Ripk1Q60855 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ripk1Q60855 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.56□□□□□ -0.56
Ripk1Q60855 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.56□□□□□ -0.56
Ripk1Q60855 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ripk1Q60855 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ripk1Q60855 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ripk1Q60855 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ripk1Q60855 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ripk1Q60855 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ripk1Q60855 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Ripk1Q60855 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ripk1Q60855 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ripk1Q60855 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.56□□□□□ -0.56
Ripk1Q60855 Gm9083-201ENSMUST00000120423 819 ntBASIC11.56□□□□□ -0.56
Ripk1Q60855 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.56□□□□□ -0.56
Ripk1Q60855 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ripk1Q60855 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ripk1Q60855 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.56□□□□□ -0.56
Ripk1Q60855 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Ripk1Q60855 Gm27390-201ENSMUST00000184516 176 ntBASIC11.56□□□□□ -0.56
Ripk1Q60855 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.56□□□□□ -0.56
Ripk1Q60855 Gm37201-201ENSMUST00000191845 523 ntBASIC11.56□□□□□ -0.56
Ripk1Q60855 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.56□□□□□ -0.56
Ripk1Q60855 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ripk1Q60855 Gm44882-201ENSMUST00000205702 802 ntBASIC11.56□□□□□ -0.56
Ripk1Q60855 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ripk1Q60855 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms