Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Prdm1Q60636 Gm4857-201ENSMUST00000192718 785 ntBASIC14.3□□□□□ -0.12
Prdm1Q60636 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.3□□□□□ -0.12
Prdm1Q60636 Gm9257-201ENSMUST00000221254 232 ntBASIC14.3□□□□□ -0.12
Prdm1Q60636 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.3□□□□□ -0.12
Prdm1Q60636 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Prdm1Q60636 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm1Q60636 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.3□□□□□ -0.12
Prdm1Q60636 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.3□□□□□ -0.12
Prdm1Q60636 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm1Q60636 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Prdm1Q60636 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm1Q60636 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Prdm1Q60636 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm1Q60636 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Prdm1Q60636 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Gm15808-201ENSMUST00000119046 604 ntBASIC14.29□□□□□ -0.12
Prdm1Q60636 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.29□□□□□ -0.12
Prdm1Q60636 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.29□□□□□ -0.12
Prdm1Q60636 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Prdm1Q60636 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.29□□□□□ -0.12
Prdm1Q60636 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Gm44262-201ENSMUST00000204969 372 ntBASIC14.29□□□□□ -0.12
Prdm1Q60636 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.29□□□□□ -0.12
Prdm1Q60636 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.29□□□□□ -0.12
Prdm1Q60636 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Prdm1Q60636 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Prdm1Q60636 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.29□□□□□ -0.12
Prdm1Q60636 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.29□□□□□ -0.12
Prdm1Q60636 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Prdm1Q60636 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm1Q60636 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.28□□□□□ -0.12
Prdm1Q60636 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Prdm1Q60636 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Prdm1Q60636 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Prdm1Q60636 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Gm7722-201ENSMUST00000120646 741 ntBASIC14.28□□□□□ -0.12
Prdm1Q60636 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.28□□□□□ -0.12
Prdm1Q60636 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prdm1Q60636 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.28□□□□□ -0.12
Prdm1Q60636 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Prdm1Q60636 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.28□□□□□ -0.12
Prdm1Q60636 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.28□□□□□ -0.12
Prdm1Q60636 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.28□□□□□ -0.12
Prdm1Q60636 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.28□□□□□ -0.12
Prdm1Q60636 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.28□□□□□ -0.12
Prdm1Q60636 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.28□□□□□ -0.12
Prdm1Q60636 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.28□□□□□ -0.12
Prdm1Q60636 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.28□□□□□ -0.12
Prdm1Q60636 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.28□□□□□ -0.12
Prdm1Q60636 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.28□□□□□ -0.12
Prdm1Q60636 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm1Q60636 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Prdm1Q60636 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.28□□□□□ -0.12
Prdm1Q60636 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms