Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm10339-203ENSMUST00000225409 1671 ntBASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm13123-201ENSMUST00000122173 492 ntBASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm26185-201ENSMUST00000157692 266 ntBASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm28631-201ENSMUST00000190740 334 ntBASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 AC134254.1-201ENSMUST00000221362 167 ntBASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 AC154687.2-201ENSMUST00000223853 640 ntBASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 n-R5s77-201ENSMUST00000083757 119 ntBASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm3365-201ENSMUST00000216296 1480 ntBASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC9.53□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.52□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm12151-201ENSMUST00000121374 290 ntBASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm2231-201ENSMUST00000125661 612 ntBASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm37922-201ENSMUST00000195596 455 ntBASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 AC139382.1-201ENSMUST00000221402 498 ntBASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC9.52□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm24526-201ENSMUST00000082921 158 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms