Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Scn2bQ56A07 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.12□□□□□ -0.47
Scn2bQ56A07 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Gm44882-201ENSMUST00000205702 802 ntBASIC12.12□□□□□ -0.47
Scn2bQ56A07 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.12□□□□□ -0.47
Scn2bQ56A07 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.12□□□□□ -0.47
Scn2bQ56A07 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Snora73a-201ENSMUST00000082453 205 ntBASIC12.12□□□□□ -0.47
Scn2bQ56A07 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn2bQ56A07 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.11□□□□□ -0.47
Scn2bQ56A07 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn2bQ56A07 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Scn2bQ56A07 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Gm9899-201ENSMUST00000065519 555 ntBASIC12.11□□□□□ -0.47
Scn2bQ56A07 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn2bQ56A07 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Scn2bQ56A07 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms