Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Gm20426-201ENSMUST00000173657 440 ntBASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Gm7848-201ENSMUST00000210739 718 ntBASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Gm17827-201ENSMUST00000211825 742 ntBASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h1Q4VGL6 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Gm23699-201ENSMUST00000158835 135 ntBASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Gm18711-201ENSMUST00000199341 750 ntBASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h1Q4VGL6 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms