Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdkl5Q3UTQ8 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdkl5Q3UTQ8 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdkl5Q3UTQ8 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.2□□□□□ -0.14
Cdkl5Q3UTQ8 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.2□□□□□ -0.14
Cdkl5Q3UTQ8 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdkl5Q3UTQ8 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cdkl5Q3UTQ8 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdkl5Q3UTQ8 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Gm18711-201ENSMUST00000199341 750 ntBASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Gm9368-201ENSMUST00000219348 831 ntBASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Gm9996-201ENSMUST00000070359 913 ntBASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdkl5Q3UTQ8 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Gm30285-201ENSMUST00000214614 422 ntBASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdkl5Q3UTQ8 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkl5Q3UTQ8 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.17□□□□□ -0.14
Cdkl5Q3UTQ8 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkl5Q3UTQ8 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkl5Q3UTQ8 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkl5Q3UTQ8 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkl5Q3UTQ8 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkl5Q3UTQ8 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkl5Q3UTQ8 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdkl5Q3UTQ8 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdkl5Q3UTQ8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms