Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Gm26083-201ENSMUST00000157904 193 ntBASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Gm38317-201ENSMUST00000195564 343 ntBASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf44Q3UHJ8 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Gm15276-201ENSMUST00000145953 498 ntBASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Gm25668-201ENSMUST00000157700 129 ntBASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Gm4034-201ENSMUST00000187674 480 ntBASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Gm19187-201ENSMUST00000206781 892 ntBASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf44Q3UHJ8 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rnf44Q3UHJ8 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf44Q3UHJ8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf44Q3UHJ8 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf44Q3UHJ8 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf44Q3UHJ8 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf44Q3UHJ8 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf44Q3UHJ8 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf44Q3UHJ8 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf44Q3UHJ8 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf44Q3UHJ8 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf44Q3UHJ8 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf44Q3UHJ8 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms