Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Gm26286-201ENSMUST00000104166 134 ntBASIC13.25□□□□□ -0.29
Col9a2Q07643 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Col9a2Q07643 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Col9a2Q07643 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.25□□□□□ -0.29
Col9a2Q07643 Gm12165-201ENSMUST00000117047 342 ntBASIC13.25□□□□□ -0.29
Col9a2Q07643 Gm13047-201ENSMUST00000117116 815 ntBASIC13.25□□□□□ -0.29
Col9a2Q07643 Gm13611-201ENSMUST00000118269 318 ntBASIC13.25□□□□□ -0.29
Col9a2Q07643 Gm5419-201ENSMUST00000119301 527 ntBASIC13.25□□□□□ -0.29
Col9a2Q07643 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Col9a2Q07643 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.25□□□□□ -0.29
Col9a2Q07643 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Col9a2Q07643 Gm8959-201ENSMUST00000213150 571 ntBASIC13.25□□□□□ -0.29
Col9a2Q07643 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.25□□□□□ -0.29
Col9a2Q07643 Gm9797-202ENSMUST00000218003 294 ntBASIC13.25□□□□□ -0.29
Col9a2Q07643 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col9a2Q07643 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col9a2Q07643 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col9a2Q07643 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.25□□□□□ -0.29
Col9a2Q07643 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col9a2Q07643 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Col9a2Q07643 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a2Q07643 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.24□□□□□ -0.29
Col9a2Q07643 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Col9a2Q07643 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.24□□□□□ -0.29
Col9a2Q07643 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a2Q07643 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.24□□□□□ -0.29
Col9a2Q07643 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a2Q07643 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a2Q07643 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Col9a2Q07643 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a2Q07643 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Col9a2Q07643 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a2Q07643 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a2Q07643 Gm7851-201ENSMUST00000117574 323 ntBASIC13.24□□□□□ -0.29
Col9a2Q07643 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.24□□□□□ -0.29
Col9a2Q07643 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.24□□□□□ -0.29
Col9a2Q07643 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a2Q07643 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Col9a2Q07643 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a2Q07643 Gm9630-201ENSMUST00000178304 885 ntBASIC13.24□□□□□ -0.29
Col9a2Q07643 Gm18038-201ENSMUST00000197900 485 ntBASIC13.24□□□□□ -0.29
Col9a2Q07643 Gm18711-201ENSMUST00000199341 750 ntBASIC13.24□□□□□ -0.29
Col9a2Q07643 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.24□□□□□ -0.29
Col9a2Q07643 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.24□□□□□ -0.29
Col9a2Q07643 Gm807-202ENSMUST00000224929 408 ntBASIC13.24□□□□□ -0.29
Col9a2Q07643 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a2Q07643 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a2Q07643 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a2Q07643 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Col9a2Q07643 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Col9a2Q07643 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col9a2Q07643 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col9a2Q07643 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.24□□□□□ -0.29
Col9a2Q07643 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a2Q07643 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.24□□□□□ -0.29
Col9a2Q07643 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a2Q07643 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.24□□□□□ -0.29
Col9a2Q07643 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a2Q07643 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a2Q07643 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.24□□□□□ -0.29
Col9a2Q07643 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a2Q07643 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a2Q07643 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.23□□□□□ -0.29
Col9a2Q07643 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col9a2Q07643 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.23□□□□□ -0.29
Col9a2Q07643 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.23□□□□□ -0.29
Col9a2Q07643 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col9a2Q07643 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Gm12196-201ENSMUST00000120954 262 ntBASIC13.23□□□□□ -0.29
Col9a2Q07643 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.23□□□□□ -0.29
Col9a2Q07643 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.23□□□□□ -0.29
Col9a2Q07643 Gm10051-201ENSMUST00000145209 414 ntBASIC13.23□□□□□ -0.29
Col9a2Q07643 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms