Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
Col1a2Q01149 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col1a2Q01149 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Col1a2Q01149 Gm9129-201ENSMUST00000218173 1689 ntBASIC15.25■□□□□ 0.03
Col1a2Q01149 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col1a2Q01149 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col1a2Q01149 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col1a2Q01149 Mup-ps26-201ENSMUST00000121751 202 ntBASIC15.24■□□□□ 0.03
Col1a2Q01149 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col1a2Q01149 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col1a2Q01149 Gm9034-201ENSMUST00000182071 1005 ntBASIC15.24■□□□□ 0.03
Col1a2Q01149 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col1a2Q01149 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC15.24■□□□□ 0.03
Col1a2Q01149 Ighv1-60-201ENSMUST00000195816 405 ntBASIC15.24■□□□□ 0.03
Col1a2Q01149 Gm19287-201ENSMUST00000203190 358 ntBASIC15.24■□□□□ 0.03
Col1a2Q01149 Gm43916-201ENSMUST00000205062 967 ntBASIC15.24■□□□□ 0.03
Col1a2Q01149 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col1a2Q01149 Gm45484-201ENSMUST00000210310 1141 ntBASIC15.24■□□□□ 0.03
Col1a2Q01149 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col1a2Q01149 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col1a2Q01149 AC130671.2-201ENSMUST00000227224 1621 ntBASIC15.24■□□□□ 0.03
Col1a2Q01149 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Col1a2Q01149 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col1a2Q01149 Gm13910-201ENSMUST00000121752 1428 ntBASIC15.24■□□□□ 0.03
Col1a2Q01149 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col1a2Q01149 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Col1a2Q01149 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col1a2Q01149 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col1a2Q01149 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col1a2Q01149 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col1a2Q01149 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col1a2Q01149 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col1a2Q01149 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Col1a2Q01149 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Col1a2Q01149 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col1a2Q01149 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Col1a2Q01149 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Col1a2Q01149 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col1a2Q01149 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC15.24■□□□□ 0.03
Col1a2Q01149 Gm9540-201ENSMUST00000188230 478 ntBASIC15.24■□□□□ 0.03
Col1a2Q01149 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC15.24■□□□□ 0.03
Col1a2Q01149 Gm6867-201ENSMUST00000219165 425 ntBASIC15.24■□□□□ 0.03
Col1a2Q01149 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.23■□□□□ 0.03
Col1a2Q01149 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC15.23■□□□□ 0.03
Col1a2Q01149 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Col1a2Q01149 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Gm17391-201ENSMUST00000171036 126 ntBASIC15.23■□□□□ 0.03
Col1a2Q01149 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC15.23■□□□□ 0.03
Col1a2Q01149 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC15.23■□□□□ 0.03
Col1a2Q01149 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC15.23■□□□□ 0.03
Col1a2Q01149 CT009713.8-202ENSMUST00000224732 385 ntBASIC15.23■□□□□ 0.03
Col1a2Q01149 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Col1a2Q01149 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col1a2Q01149 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col1a2Q01149 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col1a2Q01149 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Col1a2Q01149 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col1a2Q01149 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col1a2Q01149 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col1a2Q01149 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Col1a2Q01149 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col1a2Q01149 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col1a2Q01149 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col1a2Q01149 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Col1a2Q01149 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col1a2Q01149 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col1a2Q01149 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col1a2Q01149 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC15.22■□□□□ 0.03
Col1a2Q01149 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col1a2Q01149 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col1a2Q01149 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col1a2Q01149 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col1a2Q01149 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col1a2Q01149 Gm8731-201ENSMUST00000118088 412 ntBASIC15.22■□□□□ 0.03
Col1a2Q01149 Gm15207-201ENSMUST00000119259 442 ntBASIC15.22■□□□□ 0.03
Col1a2Q01149 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col1a2Q01149 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC15.22■□□□□ 0.03
Col1a2Q01149 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Col1a2Q01149 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col1a2Q01149 Gm7395-201ENSMUST00000216059 1045 ntBASIC15.22■□□□□ 0.03
Col1a2Q01149 Gm10179-201ENSMUST00000086233 688 ntBASIC15.22■□□□□ 0.03
Col1a2Q01149 Gm9796-201ENSMUST00000062249 2250 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms