Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Smn1P97801 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.49□□□□□ -0.73
Smn1P97801 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Smn1P97801 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Gm7488-201ENSMUST00000117148 684 ntBASIC10.49□□□□□ -0.73
Smn1P97801 Gm12363-201ENSMUST00000122250 668 ntBASIC10.49□□□□□ -0.73
Smn1P97801 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.49□□□□□ -0.73
Smn1P97801 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.49□□□□□ -0.73
Smn1P97801 Gm19163-201ENSMUST00000223313 780 ntBASIC10.49□□□□□ -0.73
Smn1P97801 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.49□□□□□ -0.73
Smn1P97801 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.49□□□□□ -0.73
Smn1P97801 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Smn1P97801 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Smn1P97801 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smn1P97801 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Smn1P97801 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Smn1P97801 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.48□□□□□ -0.73
Smn1P97801 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Smn1P97801 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Smn1P97801 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.48□□□□□ -0.73
Smn1P97801 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.48□□□□□ -0.73
Smn1P97801 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Smn1P97801 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Smn1P97801 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Smn1P97801 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.48□□□□□ -0.73
Smn1P97801 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Gm27243-201ENSMUST00000183964 521 ntBASIC10.48□□□□□ -0.73
Smn1P97801 Gm4034-201ENSMUST00000187674 480 ntBASIC10.48□□□□□ -0.73
Smn1P97801 Gm38092-201ENSMUST00000195600 653 ntBASIC10.48□□□□□ -0.73
Smn1P97801 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.48□□□□□ -0.73
Smn1P97801 Gm24526-201ENSMUST00000082921 158 ntBASIC10.48□□□□□ -0.73
Smn1P97801 Gm24136-201ENSMUST00000083374 165 ntBASIC10.48□□□□□ -0.73
Smn1P97801 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Smn1P97801 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.48□□□□□ -0.73
Smn1P97801 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Smn1P97801 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Smn1P97801 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.48□□□□□ -0.73
Smn1P97801 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Smn1P97801 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Smn1P97801 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smn1P97801 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.47□□□□□ -0.73
Smn1P97801 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.47□□□□□ -0.73
Smn1P97801 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Smn1P97801 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smn1P97801 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smn1P97801 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smn1P97801 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smn1P97801 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smn1P97801 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smn1P97801 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.47□□□□□ -0.73
Smn1P97801 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Smn1P97801 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smn1P97801 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smn1P97801 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms