Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm5298-201ENSMUST00000201122 892 ntBASIC11.33□□□□□ -0.6
Cacna1aP97445 Gm6905-201ENSMUST00000205729 511 ntBASIC11.33□□□□□ -0.6
Cacna1aP97445 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.33□□□□□ -0.6
Cacna1aP97445 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.33□□□□□ -0.6
Cacna1aP97445 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Cacna1aP97445 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.33□□□□□ -0.6
Cacna1aP97445 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Cacna1aP97445 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.33□□□□□ -0.6
Cacna1aP97445 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.33□□□□□ -0.6
Cacna1aP97445 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.33□□□□□ -0.6
Cacna1aP97445 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.33□□□□□ -0.6
Cacna1aP97445 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Mir1956-201ENSMUST00000157748 65 ntBASIC11.33□□□□□ -0.6
Cacna1aP97445 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.33□□□□□ -0.6
Cacna1aP97445 Gm35960-201ENSMUST00000202712 767 ntBASIC11.33□□□□□ -0.6
Cacna1aP97445 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.33□□□□□ -0.6
Cacna1aP97445 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.33□□□□□ -0.6
Cacna1aP97445 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cacna1aP97445 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Cacna1aP97445 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.32□□□□□ -0.6
Cacna1aP97445 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Cacna1aP97445 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Gm11451-201ENSMUST00000118946 630 ntBASIC11.32□□□□□ -0.6
Cacna1aP97445 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.32□□□□□ -0.6
Cacna1aP97445 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.32□□□□□ -0.6
Cacna1aP97445 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.32□□□□□ -0.6
Cacna1aP97445 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.32□□□□□ -0.6
Cacna1aP97445 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cacna1aP97445 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Cacna1aP97445 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.32□□□□□ -0.6
Cacna1aP97445 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Gm23596-201ENSMUST00000104304 132 ntBASIC11.32□□□□□ -0.6
Cacna1aP97445 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.32□□□□□ -0.6
Cacna1aP97445 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.32□□□□□ -0.6
Cacna1aP97445 Gm9022-201ENSMUST00000182482 992 ntBASIC11.32□□□□□ -0.6
Cacna1aP97445 Gm45398-201ENSMUST00000210561 165 ntBASIC11.32□□□□□ -0.6
Cacna1aP97445 AC164087.2-201ENSMUST00000216206 1072 ntBASIC11.32□□□□□ -0.6
Cacna1aP97445 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.32□□□□□ -0.6
Cacna1aP97445 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cacna1aP97445 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cacna1aP97445 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms