Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lig3P97386 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lig3P97386 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lig3P97386 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lig3P97386 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lig3P97386 Gm8385-201ENSMUST00000058999 643 ntBASIC13.46□□□□□ -0.25
Lig3P97386 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lig3P97386 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.46□□□□□ -0.25
Lig3P97386 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lig3P97386 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lig3P97386 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lig3P97386 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lig3P97386 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.46□□□□□ -0.26
Lig3P97386 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Lig3P97386 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Lig3P97386 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lig3P97386 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Lig3P97386 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Lig3P97386 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Lig3P97386 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.46□□□□□ -0.26
Lig3P97386 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Lig3P97386 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
Lig3P97386 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lig3P97386 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.45□□□□□ -0.26
Lig3P97386 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Lig3P97386 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.45□□□□□ -0.26
Lig3P97386 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.45□□□□□ -0.26
Lig3P97386 Gm12502-201ENSMUST00000120197 444 ntBASIC13.45□□□□□ -0.26
Lig3P97386 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.45□□□□□ -0.26
Lig3P97386 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.45□□□□□ -0.26
Lig3P97386 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.45□□□□□ -0.26
Lig3P97386 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Gm27046-201ENSMUST00000182160 463 ntBASIC13.45□□□□□ -0.26
Lig3P97386 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.45□□□□□ -0.26
Lig3P97386 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Lig3P97386 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Lig3P97386 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.45□□□□□ -0.26
Lig3P97386 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.45□□□□□ -0.26
Lig3P97386 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Lig3P97386 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Lig3P97386 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Lig3P97386 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Lig3P97386 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lig3P97386 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.44□□□□□ -0.26
Lig3P97386 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Gm23200-201ENSMUST00000104379 132 ntBASIC13.44□□□□□ -0.26
Lig3P97386 Gm25214-201ENSMUST00000104573 129 ntBASIC13.44□□□□□ -0.26
Lig3P97386 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Lig3P97386 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.44□□□□□ -0.26
Lig3P97386 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.44□□□□□ -0.26
Lig3P97386 Gm44262-201ENSMUST00000204969 372 ntBASIC13.44□□□□□ -0.26
Lig3P97386 Gm5950-201ENSMUST00000213337 772 ntBASIC13.44□□□□□ -0.26
Lig3P97386 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Lig3P97386 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lig3P97386 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms