Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SgcbP82349 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SgcbP82349 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.98□□□□□ -0.65
SgcbP82349 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SgcbP82349 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SgcbP82349 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SgcbP82349 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SgcbP82349 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.98□□□□□ -0.65
SgcbP82349 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
SgcbP82349 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
SgcbP82349 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
SgcbP82349 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
SgcbP82349 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
SgcbP82349 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Gm14760-201ENSMUST00000121831 999 ntBASIC10.97□□□□□ -0.65
SgcbP82349 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.97□□□□□ -0.65
SgcbP82349 Gm15276-201ENSMUST00000145953 498 ntBASIC10.97□□□□□ -0.65
SgcbP82349 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.97□□□□□ -0.65
SgcbP82349 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.97□□□□□ -0.65
SgcbP82349 Gm6546-201ENSMUST00000192096 766 ntBASIC10.97□□□□□ -0.65
SgcbP82349 Gm37259-201ENSMUST00000193903 849 ntBASIC10.97□□□□□ -0.65
SgcbP82349 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Gm8712-201ENSMUST00000221090 701 ntBASIC10.97□□□□□ -0.65
SgcbP82349 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.97□□□□□ -0.65
SgcbP82349 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.97□□□□□ -0.65
SgcbP82349 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Gm24136-201ENSMUST00000083374 165 ntBASIC10.97□□□□□ -0.65
SgcbP82349 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Gm42651-201ENSMUST00000199851 1339 ntBASIC10.97□□□□□ -0.65
SgcbP82349 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
SgcbP82349 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
SgcbP82349 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.97□□□□□ -0.65
SgcbP82349 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.97□□□□□ -0.65
SgcbP82349 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SgcbP82349 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SgcbP82349 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.96□□□□□ -0.65
SgcbP82349 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcbP82349 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcbP82349 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcbP82349 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcbP82349 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcbP82349 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcbP82349 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
SgcbP82349 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
SgcbP82349 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SgcbP82349 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SgcbP82349 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcbP82349 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcbP82349 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SgcbP82349 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SgcbP82349 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcbP82349 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
SgcbP82349 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SgcbP82349 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcbP82349 Mir877-201ENSMUST00000104738 85 ntBASIC10.96□□□□□ -0.65
SgcbP82349 Gm14832-201ENSMUST00000121289 322 ntBASIC10.96□□□□□ -0.65
SgcbP82349 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.96□□□□□ -0.65
SgcbP82349 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SgcbP82349 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SgcbP82349 Gm16107-201ENSMUST00000162523 862 ntBASIC10.96□□□□□ -0.65
SgcbP82349 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.96□□□□□ -0.65
SgcbP82349 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.96□□□□□ -0.65
SgcbP82349 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.96□□□□□ -0.65
SgcbP82349 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.96□□□□□ -0.65
SgcbP82349 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.96□□□□□ -0.65
SgcbP82349 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.96□□□□□ -0.65
SgcbP82349 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcbP82349 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcbP82349 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcbP82349 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgcbP82349 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgcbP82349 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgcbP82349 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms