Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lhx1P63006 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Lhx1P63006 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.05□□□□□ -0.48
Lhx1P63006 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lhx1P63006 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lhx1P63006 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lhx1P63006 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Lhx1P63006 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.05□□□□□ -0.48
Lhx1P63006 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Lhx1P63006 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Gm37466-201ENSMUST00000195692 652 ntBASIC12.05□□□□□ -0.48
Lhx1P63006 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.05□□□□□ -0.48
Lhx1P63006 Gm43962-201ENSMUST00000203898 190 ntBASIC12.05□□□□□ -0.48
Lhx1P63006 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.05□□□□□ -0.48
Lhx1P63006 Gm19208-201ENSMUST00000213861 912 ntBASIC12.05□□□□□ -0.48
Lhx1P63006 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.05□□□□□ -0.48
Lhx1P63006 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Lhx1P63006 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lhx1P63006 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.05□□□□□ -0.48
Lhx1P63006 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Lhx1P63006 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.05□□□□□ -0.48
Lhx1P63006 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx1P63006 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lhx1P63006 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Gm22133-201ENSMUST00000102082 109 ntBASIC12.04□□□□□ -0.48
Lhx1P63006 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.04□□□□□ -0.48
Lhx1P63006 Gm24749-201ENSMUST00000157838 343 ntBASIC12.04□□□□□ -0.48
Lhx1P63006 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.04□□□□□ -0.48
Lhx1P63006 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.04□□□□□ -0.48
Lhx1P63006 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.04□□□□□ -0.48
Lhx1P63006 Gm44124-201ENSMUST00000204159 472 ntBASIC12.04□□□□□ -0.48
Lhx1P63006 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.04□□□□□ -0.48
Lhx1P63006 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.04□□□□□ -0.48
Lhx1P63006 Gm18730-201ENSMUST00000218038 343 ntBASIC12.04□□□□□ -0.48
Lhx1P63006 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lhx1P63006 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Lhx1P63006 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.04□□□□□ -0.48
Lhx1P63006 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.04□□□□□ -0.48
Lhx1P63006 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lhx1P63006 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx1P63006 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lhx1P63006 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx1P63006 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx1P63006 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx1P63006 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx1P63006 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.03□□□□□ -0.48
Lhx1P63006 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx1P63006 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx1P63006 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx1P63006 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx1P63006 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lhx1P63006 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Lhx1P63006 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lhx1P63006 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lhx1P63006 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lhx1P63006 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms