Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.78□□□□□ -0.68
Lsm6P62313 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.78□□□□□ -0.68
Lsm6P62313 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.78□□□□□ -0.68
Lsm6P62313 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Lsm6P62313 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Lsm6P62313 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Gm42937-201ENSMUST00000197360 752 ntBASIC10.78□□□□□ -0.68
Lsm6P62313 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.78□□□□□ -0.68
Lsm6P62313 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.78□□□□□ -0.68
Lsm6P62313 Gm45880-201ENSMUST00000213041 853 ntBASIC10.78□□□□□ -0.68
Lsm6P62313 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Lsm6P62313 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Lsm6P62313 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.78□□□□□ -0.68
Lsm6P62313 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Lsm6P62313 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.78□□□□□ -0.68
Lsm6P62313 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.78□□□□□ -0.68
Lsm6P62313 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm6P62313 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Lsm6P62313 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.77□□□□□ -0.68
Lsm6P62313 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Lsm6P62313 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
Lsm6P62313 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
Lsm6P62313 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Lsm6P62313 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Lsm6P62313 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.68
Lsm6P62313 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Lsm6P62313 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Lsm6P62313 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Lsm6P62313 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Lsm6P62313 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Lsm6P62313 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Lsm6P62313 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Lsm6P62313 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Lsm6P62313 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Lsm6P62313 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Lsm6P62313 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm6P62313 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm6P62313 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm6P62313 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.77□□□□□ -0.69
Lsm6P62313 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.77□□□□□ -0.69
Lsm6P62313 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm6P62313 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Lsm6P62313 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Lsm6P62313 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Lsm6P62313 Gm11793-201ENSMUST00000120433 981 ntBASIC10.77□□□□□ -0.69
Lsm6P62313 Gm13786-201ENSMUST00000122371 333 ntBASIC10.77□□□□□ -0.69
Lsm6P62313 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Lsm6P62313 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.77□□□□□ -0.69
Lsm6P62313 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm6P62313 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.77□□□□□ -0.69
Lsm6P62313 Gm28882-201ENSMUST00000185504 314 ntBASIC10.77□□□□□ -0.69
Lsm6P62313 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm6P62313 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.77□□□□□ -0.69
Lsm6P62313 Gm35960-201ENSMUST00000202712 767 ntBASIC10.77□□□□□ -0.69
Lsm6P62313 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.77□□□□□ -0.69
Lsm6P62313 Gm7046-201ENSMUST00000221351 977 ntBASIC10.77□□□□□ -0.69
Lsm6P62313 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm6P62313 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm6P62313 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm6P62313 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm6P62313 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm6P62313 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm6P62313 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm6P62313 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm6P62313 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm6P62313 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Lsm6P62313 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm6P62313 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lsm6P62313 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lsm6P62313 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Lsm6P62313 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lsm6P62313 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Lsm6P62313 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Lsm6P62313 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lsm6P62313 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lsm6P62313 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lsm6P62313 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lsm6P62313 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lsm6P62313 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lsm6P62313 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lsm6P62313 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.76□□□□□ -0.69
Lsm6P62313 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Lsm6P62313 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms