Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.82□□□□□ -0.2
Rrp1P56183 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.82□□□□□ -0.2
Rrp1P56183 Gm13736-201ENSMUST00000119272 253 ntBASIC13.82□□□□□ -0.2
Rrp1P56183 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Rrp1P56183 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rrp1P56183 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.82□□□□□ -0.2
Rrp1P56183 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Gm27682-201ENSMUST00000183930 110 ntBASIC13.82□□□□□ -0.2
Rrp1P56183 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rrp1P56183 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.82□□□□□ -0.2
Rrp1P56183 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.82□□□□□ -0.2
Rrp1P56183 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.82□□□□□ -0.2
Rrp1P56183 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rrp1P56183 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.82□□□□□ -0.2
Rrp1P56183 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Gm18062-201ENSMUST00000208020 547 ntBASIC13.82□□□□□ -0.2
Rrp1P56183 Gm18055-201ENSMUST00000208254 547 ntBASIC13.82□□□□□ -0.2
Rrp1P56183 Gm7561-201ENSMUST00000211203 886 ntBASIC13.82□□□□□ -0.2
Rrp1P56183 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rrp1P56183 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Gm6091-201ENSMUST00000098307 165 ntBASIC13.82□□□□□ -0.2
Rrp1P56183 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.82□□□□□ -0.2
Rrp1P56183 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.82□□□□□ -0.2
Rrp1P56183 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rrp1P56183 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rrp1P56183 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.82□□□□□ -0.2
Rrp1P56183 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rrp1P56183 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rrp1P56183 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Rrp1P56183 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp1P56183 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.81□□□□□ -0.2
Rrp1P56183 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp1P56183 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.81□□□□□ -0.2
Rrp1P56183 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp1P56183 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp1P56183 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp1P56183 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.81□□□□□ -0.2
Rrp1P56183 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp1P56183 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp1P56183 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.81□□□□□ -0.2
Rrp1P56183 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rrp1P56183 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp1P56183 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp1P56183 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.81□□□□□ -0.2
Rrp1P56183 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.81□□□□□ -0.2
Rrp1P56183 Gm45925-201ENSMUST00000218882 744 ntBASIC13.81□□□□□ -0.2
Rrp1P56183 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp1P56183 Gm10268-201ENSMUST00000085340 555 ntBASIC13.81□□□□□ -0.2
Rrp1P56183 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.81□□□□□ -0.2
Rrp1P56183 Cog3-203ENSMUST00000227473 4197 ntBASIC13.81□□□□□ -0.2
Rrp1P56183 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp1P56183 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp1P56183 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.81□□□□□ -0.2
Rrp1P56183 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp1P56183 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp1P56183 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rrp1P56183 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp1P56183 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp1P56183 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.81□□□□□ -0.2
Rrp1P56183 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rrp1P56183 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rrp1P56183 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rrp1P56183 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.8□□□□□ -0.2
Rrp1P56183 Gm24830-201ENSMUST00000102024 166 ntBASIC13.8□□□□□ -0.2
Rrp1P56183 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rrp1P56183 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.8□□□□□ -0.2
Rrp1P56183 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.8□□□□□ -0.2
Rrp1P56183 Gm11425-201ENSMUST00000119608 498 ntBASIC13.8□□□□□ -0.2
Rrp1P56183 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms