Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.06□□□□□ -0.32
NrlP54846 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Gm22133-201ENSMUST00000102082 109 ntBASIC13.06□□□□□ -0.32
NrlP54846 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Gm15782-201ENSMUST00000121073 445 ntBASIC13.06□□□□□ -0.32
NrlP54846 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.06□□□□□ -0.32
NrlP54846 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.06□□□□□ -0.32
NrlP54846 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.06□□□□□ -0.32
NrlP54846 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.06□□□□□ -0.32
NrlP54846 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.06□□□□□ -0.32
NrlP54846 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
NrlP54846 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
NrlP54846 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NrlP54846 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
NrlP54846 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NrlP54846 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NrlP54846 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NrlP54846 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NrlP54846 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NrlP54846 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NrlP54846 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.05□□□□□ -0.32
NrlP54846 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NrlP54846 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.05□□□□□ -0.32
NrlP54846 Gm14058-201ENSMUST00000116082 735 ntBASIC13.05□□□□□ -0.32
NrlP54846 Gm12165-201ENSMUST00000117047 342 ntBASIC13.05□□□□□ -0.32
NrlP54846 Gm13035-201ENSMUST00000117496 342 ntBASIC13.05□□□□□ -0.32
NrlP54846 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.05□□□□□ -0.32
NrlP54846 Gm9022-201ENSMUST00000182482 992 ntBASIC13.05□□□□□ -0.32
NrlP54846 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.05□□□□□ -0.32
NrlP54846 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.05□□□□□ -0.32
NrlP54846 Gm43962-201ENSMUST00000203898 190 ntBASIC13.05□□□□□ -0.32
NrlP54846 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.05□□□□□ -0.32
NrlP54846 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NrlP54846 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NrlP54846 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NrlP54846 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NrlP54846 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NrlP54846 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
NrlP54846 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NrlP54846 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NrlP54846 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NrlP54846 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.05□□□□□ -0.32
NrlP54846 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NrlP54846 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.05□□□□□ -0.32
NrlP54846 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NrlP54846 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NrlP54846 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NrlP54846 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NrlP54846 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
NrlP54846 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
NrlP54846 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.04□□□□□ -0.32
NrlP54846 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Gm24934-201ENSMUST00000103764 111 ntBASIC13.04□□□□□ -0.32
NrlP54846 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.04□□□□□ -0.32
NrlP54846 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.04□□□□□ -0.32
NrlP54846 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.04□□□□□ -0.32
NrlP54846 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NrlP54846 Mir7677-201ENSMUST00000184226 67 ntBASIC13.04□□□□□ -0.32
NrlP54846 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.04□□□□□ -0.32
NrlP54846 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.04□□□□□ -0.32
NrlP54846 Gm17827-201ENSMUST00000211825 742 ntBASIC13.04□□□□□ -0.32
NrlP54846 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.04□□□□□ -0.32
NrlP54846 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.04□□□□□ -0.32
NrlP54846 Gm270-201ENSMUST00000223010 976 ntBASIC13.04□□□□□ -0.32
NrlP54846 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.04□□□□□ -0.32
NrlP54846 Gm21811-201ENSMUST00000096485 930 ntBASIC13.04□□□□□ -0.32
NrlP54846 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NrlP54846 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.04□□□□□ -0.32
NrlP54846 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms