Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Msh6P54276 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Msh6P54276 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Msh6P54276 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC15.46■□□□□ 0.07
Msh6P54276 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC15.46■□□□□ 0.07
Msh6P54276 Gm5852-201ENSMUST00000194119 1021 ntBASIC15.46■□□□□ 0.07
Msh6P54276 Gm5542-201ENSMUST00000195485 1089 ntBASIC15.46■□□□□ 0.07
Msh6P54276 Gm34023-201ENSMUST00000195539 217 ntBASIC15.46■□□□□ 0.07
Msh6P54276 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC15.46■□□□□ 0.07
Msh6P54276 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Msh6P54276 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Msh6P54276 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Msh6P54276 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Msh6P54276 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Msh6P54276 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC15.45■□□□□ 0.06
Msh6P54276 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Msh6P54276 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Msh6P54276 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Msh6P54276 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Msh6P54276 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.45■□□□□ 0.06
Msh6P54276 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Msh6P54276 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.45■□□□□ 0.06
Msh6P54276 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Msh6P54276 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Msh6P54276 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.45■□□□□ 0.06
Msh6P54276 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Msh6P54276 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Msh6P54276 Gm11511-201ENSMUST00000118146 540 ntBASIC15.45■□□□□ 0.06
Msh6P54276 Gm14585-201ENSMUST00000120713 634 ntBASIC15.45■□□□□ 0.06
Msh6P54276 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Msh6P54276 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC15.45■□□□□ 0.06
Msh6P54276 Gm8492-201ENSMUST00000182375 987 ntBASIC15.45■□□□□ 0.06
Msh6P54276 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Msh6P54276 Gm42629-201ENSMUST00000199063 1102 ntBASIC15.45■□□□□ 0.06
Msh6P54276 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Msh6P54276 Gm17931-201ENSMUST00000208132 634 ntBASIC15.45■□□□□ 0.06
Msh6P54276 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC15.45■□□□□ 0.06
Msh6P54276 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC15.45■□□□□ 0.06
Msh6P54276 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Msh6P54276 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Msh6P54276 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Msh6P54276 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Msh6P54276 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Msh6P54276 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Msh6P54276 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Msh6P54276 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC15.44■□□□□ 0.06
Msh6P54276 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
Msh6P54276 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC15.44■□□□□ 0.06
Msh6P54276 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC15.44■□□□□ 0.06
Msh6P54276 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC15.44■□□□□ 0.06
Msh6P54276 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Msh6P54276 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Msh6P54276 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC15.44■□□□□ 0.06
Msh6P54276 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh6P54276 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC15.44■□□□□ 0.06
Msh6P54276 Gm43447-201ENSMUST00000198471 1535 ntBASIC15.44■□□□□ 0.06
Msh6P54276 AC158355.1-201ENSMUST00000215895 1705 ntBASIC15.43■□□□□ 0.06
Msh6P54276 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Msh6P54276 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC15.43■□□□□ 0.06
Msh6P54276 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Msh6P54276 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Msh6P54276 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Msh6P54276 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Msh6P54276 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Msh6P54276 Gm23912-201ENSMUST00000104687 87 ntBASIC15.43■□□□□ 0.06
Msh6P54276 Gm4726-201ENSMUST00000135604 736 ntBASIC15.43■□□□□ 0.06
Msh6P54276 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC15.43■□□□□ 0.06
Msh6P54276 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC15.43■□□□□ 0.06
Msh6P54276 Gm6019-201ENSMUST00000148369 736 ntBASIC15.43■□□□□ 0.06
Msh6P54276 Gm5706-201ENSMUST00000181525 993 ntBASIC15.43■□□□□ 0.06
Msh6P54276 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Msh6P54276 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC15.43■□□□□ 0.06
Msh6P54276 Gm2517-201ENSMUST00000215651 348 ntBASIC15.43■□□□□ 0.06
Msh6P54276 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Msh6P54276 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Msh6P54276 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC15.43■□□□□ 0.06
Msh6P54276 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Msh6P54276 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Msh6P54276 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Msh6P54276 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms