Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Lbx1P52955 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lbx1P52955 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lbx1P52955 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.91□□□□□ -0.5
Lbx1P52955 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Lbx1P52955 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Lbx1P52955 Gm22920-201ENSMUST00000102175 109 ntBASIC11.91□□□□□ -0.5
Lbx1P52955 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lbx1P52955 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Lbx1P52955 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.91□□□□□ -0.5
Lbx1P52955 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.91□□□□□ -0.5
Lbx1P52955 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.91□□□□□ -0.5
Lbx1P52955 Gm6423-201ENSMUST00000204315 934 ntBASIC11.91□□□□□ -0.5
Lbx1P52955 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC11.91□□□□□ -0.5
Lbx1P52955 Gm45085-201ENSMUST00000209100 441 ntBASIC11.91□□□□□ -0.5
Lbx1P52955 Gm18968-201ENSMUST00000221319 862 ntBASIC11.91□□□□□ -0.5
Lbx1P52955 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.91□□□□□ -0.5
Lbx1P52955 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lbx1P52955 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Lbx1P52955 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lbx1P52955 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lbx1P52955 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lbx1P52955 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Lbx1P52955 Rubie-203ENSMUST00000227803 2430 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lbx1P52955 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lbx1P52955 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lbx1P52955 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lbx1P52955 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lbx1P52955 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lbx1P52955 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lbx1P52955 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.9□□□□□ -0.5
Lbx1P52955 Gm11663-201ENSMUST00000117888 290 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm13315-201ENSMUST00000120376 991 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.9□□□□□ -0.5
Lbx1P52955 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lbx1P52955 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.9□□□□□ -0.5
Lbx1P52955 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lbx1P52955 Gm24248-201ENSMUST00000157321 322 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.9□□□□□ -0.5
Lbx1P52955 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lbx1P52955 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm23400-201ENSMUST00000174994 102 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm26463-201ENSMUST00000175065 101 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm24332-201ENSMUST00000175102 102 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm25959-201ENSMUST00000175112 102 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm22475-201ENSMUST00000175169 102 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm22903-201ENSMUST00000175193 102 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm25070-201ENSMUST00000175237 102 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm24159-201ENSMUST00000175264 102 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm25299-201ENSMUST00000175283 102 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm23798-201ENSMUST00000175560 102 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm23802-201ENSMUST00000175565 102 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm25708-201ENSMUST00000177687 102 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm24370-201ENSMUST00000178007 102 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm23049-201ENSMUST00000178068 102 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm28019-201ENSMUST00000178138 101 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm25571-201ENSMUST00000178322 102 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm25355-201ENSMUST00000178456 101 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm24975-201ENSMUST00000178492 101 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm23189-201ENSMUST00000178954 102 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm25100-201ENSMUST00000179750 101 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm23064-201ENSMUST00000179866 101 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC11.9□□□□□ -0.5
Lbx1P52955 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.9□□□□□ -0.5
Lbx1P52955 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Lbx1P52955 Gm2345-201ENSMUST00000193451 589 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC11.9□□□□□ -0.5
Lbx1P52955 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lbx1P52955 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.9□□□□□ -0.5
Lbx1P52955 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.9□□□□□ -0.5
Lbx1P52955 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC11.9□□□□□ -0.5
Lbx1P52955 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lbx1P52955 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lbx1P52955 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms